Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025640

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025640
Fusion NameHBV-chr4:49322993 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name4N
Sample TypeParatumor tissues
Age48
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandp11
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start49325010
Hg19 End49325010
Hg38 Start49322993
Hg38 End49322994
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12944
Virus Breakpoint23078
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404965