Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025652

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025652
Fusion NameHBV-CTBP2 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name7N
Sample TypeParatumor tissues
Age66
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandq26.13
Human Strand+
Human Integration Location Typeintronic
Hg19 Start126791021
Hg19 End126791021
Hg38 Start125102452
Hg38 End125102453
Junction Sequence-
Target Gene
Target GeneCTBP2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11727
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404977