Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025663

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025663
Fusion NameHBV-ACSM2B integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name7N
Sample TypeParatumor tissues
Age66
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr16
Cytogenetic Bandp12.3
Human Strand+
Human Integration Location Typeintronic
Hg19 Start20577968
Hg19 End20577968
Hg38 Start20566646
Hg38 End20566647
Junction Sequence-
Target Gene
Target GeneACSM2B
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1495
Virus Breakpoint2629
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404988