Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025664

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025664
Fusion NameHBV-chr16:46390973 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name7N
Sample TypeParatumor tissues
Age66
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr16
Cytogenetic Bandq11.2
Human Strand+
Human Integration Location Typeintergenic
Hg19 Start46387047
Hg19 End46387047
Hg38 Start46390973
Hg38 End46390974
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12283
Virus Breakpoint22417
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1404989