Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10025686

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10025686
Fusion NameHBV-ENSG00000270726 integration
ValidatedNo
Curated WayViMIC
MethodHepatitis B virus capture sequencing
Wet AssayYes
Sample ID-
Sample Name7N
Sample TypeParatumor tissues
Age66
GenderMale
Disease Information
Disease NameIntrahepatic cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID33037855
JournalHepatology Research
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human ChromosomechrX
Cytogenetic Bandq28
Human Strand+
Human Integration Location Typeexonic
Hg19 Start155251161
Hg19 End155251161
Hg38 Start156021496
Hg38 End156021497
Junction Sequence-
Target Gene
Target GeneENSG00000270726, WASH6P
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint190
Virus Breakpoint2224
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1405011