Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10026506

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10026506
Fusion NameHBV-WT1-AS integration
ValidatedNo
Curated WayViMIC
MethodWhole genome bisulfite sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample Typeunsure
Age-
Gender-
Disease Information
Disease NameLiver diseases and hepatocellular carcinoma (HCC).
Disease Abbreviation-
CancerYes
Literature
PubMed ID32741373
JournalBMC medicine
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr11
Cytogenetic Bandp13
Human Strand
Human Integration Location Typeexonic
Hg19 Start32458297
Hg19 End32458298
Hg38 Start32436751
Hg38 End32436752
Junction Sequence-
Target Gene
Target GeneWT1-AS
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1405843