Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10028122

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10028122
Fusion NameHBV-ENSG00000267098 integration
ValidatedNo
Curated WayViMIC
MethodWhole genome bisulfite sequencing
Wet AssayYes
Sample ID-
Sample Name-
Sample Typeunsure
Age-
Gender-
Disease Information
Disease NameLiver diseases and hepatocellular carcinoma (HCC).
Disease Abbreviation-
CancerYes
Literature
PubMed ID32741373
JournalBMC medicine
Published Year2020
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr18
Cytogenetic Bandq21.32
Human Strand
Human Integration Location Typeintronic
Hg19 Start58344368
Hg19 End58344369
Hg38 Start60677135
Hg38 End60677136
Junction Sequence-
Target Gene
Target GeneENSG00000267098
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID1407468