Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10040525

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10040525
Fusion NameHBV-ENSG00000226994 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID14
Sample Name#014N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandp22.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start35298443
Hg19 End35298443
Hg38 Start35073377
Hg38 End35073377
Junction SequenceTCTAAGTAAACAATACATGA
Target Gene
Target GeneENSG00000226994
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11045
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-