Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10040613

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10040613
Fusion NameHBV-ZDHHC14 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID14
Sample Name#014N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq25.3
Human Strand
Human Integration Location Typeexonic
Hg19 Start158094892
Hg19 End158094892
Hg38 Start157673860
Hg38 End157673860
Junction SequenceTGCCACAACCCCCACAGTCT
Target Gene
Target GeneZDHHC14
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint12767
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-