Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10040857

Genomic Region Visualization (IGV)

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Basic Information
VISDB IDTVIS10040857
Fusion NameHBV-ENSG00000237844 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID32
Sample Name#032N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq24.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start165173643
Hg19 End165173643
Hg38 Start164317133
Hg38 End164317133
Junction SequenceCGCTTTGACATTTAATGAGT
Target Gene
Target GeneENSG00000237844
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint1470
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-