Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10043729

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10043729
Fusion NameHBV-DAB2IP integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID81
Sample Name#081N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr9
Cytogenetic Bandq33.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start124423832
Hg19 End124423832
Hg38 Start121661553
Hg38 End121661553
Junction SequenceCTGTGCTAGTAAAACCGGCC
Target Gene
Target GeneDAB2IP
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_B
Virus Genome AccessionAF100309
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus strain 56, complete genome
Virus Genome Length3215 bp
Virus Breakpoint11560
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-