Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10044222

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10044222
Fusion NameHBV-ALB integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID1210
Sample Name#1210N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq13.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start74270185
Hg19 End74270185
Hg38 Start73404468
Hg38 End73404468
Junction SequenceTAGTAAACTCTGCATCTTTA
Target Gene
Target GeneALB
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_C
Virus Genome AccessionAB014381
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus 22Y04HCC genomic DNA, complete sequence
Virus Genome Length3215 bp
Virus Breakpoint11875
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-