Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10045230

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10045230
Fusion NameHBV-ADARB2-AS1 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID1760
Sample Name#1760N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr10
Cytogenetic Bandp15.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start1585298
Hg19 End1585298
Hg38 Start1543103
Hg38 End1543103
Junction Sequence-
Target Gene
Target GeneADARB2-AS1, ADARB2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_C
Virus Genome AccessionAB014381
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus 22Y04HCC genomic DNA, complete sequence
Virus Genome Length3215 bp
Virus Breakpoint1NA
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-