Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10047260

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10047260
Fusion NameHBV-ENSG00000306704 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3044
Sample Name#3044N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq15
Human Strand
Human Integration Location Typeintronic
Hg19 Start88619853
Hg19 End88619853
Hg38 Start87910135
Hg38 End87910135
Junction SequenceACACGTTAGGTCTTAAAATA
Target Gene
Target GeneENSG00000306704
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11033
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-