Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10047810

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10047810
Fusion NameHBV-chr4:73424955 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3618
Sample Name#3618N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandq13.3
Human Strand
Human Integration Location Typeintergenic
Hg19 Start74290672
Hg19 End74290672
Hg38 Start73424955
Hg38 End73424955
Junction SequenceTTCCTTCCGGACCAAGAGAA
Target Gene
Target Gene-
Nearby GeneALB
Distance3473
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint13162
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-