Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10047923

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10047923
Fusion NameHBV-ERBB4 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3637
Sample Name#3637N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq34
Human Strand
Human Integration Location Typeintronic
Hg19 Start213205586
Hg19 End213205586
Hg38 Start212340862
Hg38 End212340862
Junction SequenceTAGCTTATCTGTTTATACAT
Target Gene
Target GeneERBB4
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_E
Virus Genome AccessionAB032431
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus genomic DNA, complete sequence, isolate:HBV/E-Ch195
Virus Genome Length3212 bp
Virus Breakpoint1828
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-