Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10047990

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10047990
Fusion NameHBV-ENSG00000304923 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3651
Sample Name#3651N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq22.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start75574481
Hg19 End75574481
Hg38 Start75000344
Hg38 End75000344
Junction SequenceTAACCAGACGCGTGGTAGTA
Target Gene
Target GeneENSG00000304923
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11750
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-