Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10048078

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10048078
Fusion NameHBV-chr2:232500556 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3769
Sample Name#3769N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr2
Cytogenetic Bandq37.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start233365266
Hg19 End233365266
Hg38 Start232500556
Hg38 End232500556
Junction SequenceGACCCATCTATAATGACAGG
Target Gene
Target Gene-
Nearby GeneENSG00000301941
Distance2102
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_E
Virus Genome AccessionAB032431
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus genomic DNA, complete sequence, isolate:HBV/E-Ch195
Virus Genome Length3212 bp
Virus Breakpoint1421
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-