Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10048091

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10048091
Fusion NameHBV-GPR141 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID3769
Sample Name#3769N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr7
Cytogenetic Bandp14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start37839781
Hg19 End37839781
Hg38 Start37800179
Hg38 End37800179
Junction SequenceGAAAGGAGTACATCTAGAAC
Target Gene
Target GeneGPR141, ENSG00000290149
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_E
Virus Genome AccessionAB032431
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus genomic DNA, complete sequence, isolate:HBV/E-Ch195
Virus Genome Length3212 bp
Virus Breakpoint1980
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-