Basic Information ▼ | |
VISDB ID | TVIS10048385 |
---|---|
Fusion Name | HBV-SNTG1 integration |
Validated | No |
Curated Way | Curated |
Method | HBV capture sequencing |
Wet Assay | Yes |
Sample ID | 3906 |
Sample Name | #3906N |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | - |
Disease Abbreviation | - |
Cancer | - |
Literature ▼ | |
PubMed ID | 33563643 |
Journal | Gut |
Published Year | 2021 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr8 |
Cytogenetic Band | q11.21 |
Human Strand | |
Human Integration Location Type | intronic |
Hg19 Start | 50871425 |
Hg19 End | 50871425 |
Hg38 Start | 49958865 |
Hg38 End | 49958865 |
Junction Sequence | CATTTGGGTCCCCAAAGCAA |
Target Gene ▼ | |
Target Gene | SNTG1 |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Hepatitis B virus |
Virus Subtype Name | HBV_B |
Virus Genome Accession | AF100309 |
TaxonomyID | 10407 |
Virus Abbreviation | HBV |
Virus Genome | Hepatitis B virus strain 56, complete genome |
Virus Genome Length | 3215 bp |
Virus Breakpoint1 | 1611 |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |