Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10048470

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10048470
Fusion NameHBV-ENSG00000234464 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID402
Sample Name#402N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr1
Cytogenetic Bandq43
Human Strand
Human Integration Location Typeintronic
Hg19 Start238744368
Hg19 End238744368
Hg38 Start238581068
Hg38 End238581068
Junction SequenceAAAGGTAAAAAATTTAAATT
Target Gene
Target GeneENSG00000234464
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11808
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-