Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10048737

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10048737
Fusion NameHBV-CLYBL integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID4146
Sample Name#4146N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq32.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start100304759
Hg19 End100304759
Hg38 Start99652505
Hg38 End99652505
Junction SequenceGCTACCTGGGTGGGTAATAA
Target Gene
Target GeneCLYBL
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_G
Virus Genome AccessionHE981176
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus complete genome, genotype G, clone ARG56.5.9
Virus Genome Length3248 bp
Virus Breakpoint11999
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-