Basic Information ▼ | |
VISDB ID | TVIS10048774 |
---|---|
Fusion Name | HBV-NIHCOLE integration |
Validated | No |
Curated Way | Curated |
Method | HBV capture sequencing |
Wet Assay | Yes |
Sample ID | 4146 |
Sample Name | #4146N |
Sample Type | Tumor |
Age | - |
Gender | - |
Disease Information ▼ | |
Disease Name | - |
Disease Abbreviation | - |
Cancer | - |
Literature ▼ | |
PubMed ID | 33563643 |
Journal | Gut |
Published Year | 2021 |
Human Genome ▼ | |
Human Genome Version Description | GRCh37/hg19 |
Human Genome RefSeq Accession | GCF_000001405.13 |
Human Chromosome | chr5 |
Cytogenetic Band | q21.2 |
Human Strand | |
Human Integration Location Type | intronic |
Hg19 Start | 103535184 |
Hg19 End | 103535184 |
Hg38 Start | 104199483 |
Hg38 End | 104199483 |
Junction Sequence | TTGGCTTGTACTTTTGTTAT |
Target Gene ▼ | |
Target Gene | NIHCOLE |
Nearby Gene | - |
Distance | - |
Virus Information ▼ | |
Virus Name | Hepatitis B virus |
Virus Subtype Name | HBV_G |
Virus Genome Accession | HE981176 |
TaxonomyID | 10407 |
Virus Abbreviation | HBV |
Virus Genome | Hepatitis B virus complete genome, genotype G, clone ARG56.5.9 |
Virus Genome Length | 3248 bp |
Virus Breakpoint1 | 1702 |
Virus Breakpoint2 | - |
Virus Gene Name | - |
Virus Region Type | - |
Integrated Virus Sequence | - |
ViMIC ID | - |