Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10049050

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10049050
Fusion NameHBV-ENSG00000289911 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID802
Sample Name#802N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr6
Cytogenetic Bandq12
Human Strand
Human Integration Location Typeintronic
Hg19 Start64226143
Hg19 End64226143
Hg38 Start63516238
Hg38 End63516238
Junction SequenceAATCCACCTATCCAAAAGGT
Target Gene
Target GeneENSG00000289911
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11649
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-