Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10049077

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10049077
Fusion NameHBV-chr4:22692879 integration
ValidatedNo
Curated WayCurated
MethodHBV capture sequencing
Wet AssayYes
Sample ID908
Sample Name#908N
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID33563643
JournalGut
Published Year2021
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr4
Cytogenetic Bandp15.2
Human Strand
Human Integration Location Typeintergenic
Hg19 Start22694502
Hg19 End22694502
Hg38 Start22692879
Hg38 End22692879
Junction SequenceAACAACAAGGAAGCAGGGCA
Target Gene
Target Gene-
Nearby GeneGBA3
Distance35
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameHBV_A
Virus Genome AccessionX02763
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis b virus genome (serotype adw2)
Virus Genome Length3221 bp
Virus Breakpoint11823
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-