| Basic Information ▶ | |
| VISDB ID | TVIS10049128 |
|---|---|
| Fusion Name | HBV-chr5:1295118 integration |
| Validated | No |
| Curated Way | Curated |
| Method | HBV capture based next-generation sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | 160T |
| Sample Type | Tumor |
| Age | 52.6 10.2 (2972) |
| Gender | - |
| Disease Information ▶ | |
| Disease Name | Hepatocellular carcinoma |
| Disease Abbreviation | HCC |
| Cancer | Yes |
| Literature ▶ | |
| PubMed ID | 34209079 |
| Journal | International Journal of Molecular Sciences |
| Published Year | 2021 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh37/hg19 |
| Human Genome RefSeq Accession | GCF_000001405.13 |
| Human Chromosome | chr5 |
| Cytogenetic Band | p15.33 |
| Human Strand | + |
| Human Integration Location Type | intergenic |
| Hg19 Start | 1295233 |
| Hg19 End | 1295233 |
| Hg38 Start | 1295118 |
| Hg38 End | 1295118 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | - |
| Nearby Gene | ENSG00000300381 |
| Distance | 21 |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | DQ683578.1 |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | Hepatitis B virus from South Korea, complete genome |
| Virus Genome Length | 3215 bp |
| Virus Breakpoint1 | 1818 |
| Virus Breakpoint2 | - |
| Virus Gene Name | X protein, precore/core |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D