Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10053610

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10053610
Fusion NameHBV-PURPL integration
ValidatedNo
Curated WayCurated
MethodHigh-throughput Viral Integration Detection method
Wet AssayYes
Sample ID-
Sample Name69381
Sample TypeTumor
Age53.73(9.08)
Gender-
Disease Information
Disease NameIntrahepatic Cholangiocarcinoma
Disease AbbreviationICC
CancerYes
Literature
PubMed ID36123506
JournalHepatology International
Published Year2022
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr5
Cytogenetic Bandp14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start27249890
Hg38 End27249890
Junction Sequence-
Target Gene
Target GenePURPL
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-