Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10053693

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10053693
Fusion NameHBV-chr16:32841112 integration
ValidatedNo
Curated WayCurated
MethodHigh-throughput Viral Integration Detection method
Wet AssayYes
Sample ID-
Sample Name85818
Sample TypeTumor
Age51.10(11.13)
Gender-
Disease Information
Disease NameCombined Hepatocellular-Cholangiocarcinoma
Disease AbbreviationcHCC-CCA
CancerYes
Literature
PubMed ID36123506
JournalHepatology International
Published Year2022
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr16
Cytogenetic Bandp11.2
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start32841112
Hg38 End32841112
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000259934
Distance4852
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-