Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10053864

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10053864
Fusion NameHBV-chr3:14674337 integration
ValidatedNo
Curated WayCurated
MethodHigh-throughput Viral Integration Detection method
Wet AssayYes
Sample ID-
Sample Name76488
Sample TypeTumor
Age51.10(11.13)
Gender-
Disease Information
Disease NameCombined Hepatocellular-Cholangiocarcinoma
Disease AbbreviationcHCC-CCA
CancerYes
Literature
PubMed ID36123506
JournalHepatology International
Published Year2022
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr3
Cytogenetic Bandp25.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start14674337
Hg38 End14674337
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneC3orf20
Distance804
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1-
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-