Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10053901

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10053901
Fusion NameHBV-MT-ND4 integration
ValidatedNo
Curated WayCurated
MethodBioinformatics analysis using GRIDSS VIRUSBreakend
Wet AssayNo
Sample ID-
Sample NameSRR3105143
Sample TypeTumor
Age50
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37396703
JournalWorld Journal of Virology
Published Year2023
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human ChromosomechrM
Cytogenetic Band0
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start11079
Hg38 End11079
Junction Sequence-
Target Gene
Target GeneMT-ND4
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11559
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-