Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10057307

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10057307
Fusion NameHBV-chr4:34964090 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameIg18206
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37941707
JournalJMA Journal
Published Year2023
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr4
Cytogenetic Band
Human Strand+
Human Integration Location Type
Hg19 Start-
Hg19 End-
Hg38 Start34,964,090
Hg38 End34,964,091
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneENSG00000238694
Distance2151
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionAB033550.1
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus DNA, complete genome
Virus Genome Length3215 bp
Virus Breakpoint11,806
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-