Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10057613

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10057613
Fusion NameHBV-chr19:17596578 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameIg18207
Sample TypeTumor
Age-
Gender-
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37941707
JournalJMA Journal
Published Year2023
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr19
Cytogenetic Band
Human Strand-
Human Integration Location Type
Hg19 Start-
Hg19 End-
Hg38 Start17,596,578
Hg38 End17,596,579
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneUNC13A
Distance4758
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome AccessionAB033550.1
TaxonomyID10407
Virus AbbreviationHBV
Virus GenomeHepatitis B virus DNA, complete genome
Virus Genome Length3215 bp
Virus Breakpoint13,033
Virus Breakpoint2-
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-