Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10057715

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10057715
Fusion NameHBV-chrX:101546256 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEN1
Sample TypeTumor
Age60
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human ChromosomechrX
Cytogenetic Bandq22.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start101546256
Hg38 End101546344
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneARMCX1
Distance4204
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11412
Virus Breakpoint21476
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-