Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10057717

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10057717
Fusion NameHBV-chr20:12487050 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEN1
Sample TypeTumor
Age60
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr20
Cytogenetic Bandp12.1
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start12487050
Hg38 End12487093
Junction Sequence-
Target Gene
Target Gene-
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11367
Virus Breakpoint21476
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-