Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10057964

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10057964
Fusion NameHBV-chr3:49820979 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEN2
Sample TypeTumor
Age29
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr3
Cytogenetic Bandp21.31
Human Strand
Human Integration Location Typeintergenic
Hg19 Start-
Hg19 End-
Hg38 Start49820979
Hg38 End49821003
Junction Sequence-
Target Gene
Target Gene-
Nearby GeneUBA7
Distance7027
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11607
Virus Breakpoint21735
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-