Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10058093

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10058093
Fusion NameHBV-PURPL integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEN2
Sample TypeTumor
Age29
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr5
Cytogenetic Bandp14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start27381712
Hg38 End27381736
Junction Sequence-
Target Gene
Target GenePURPL
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11652
Virus Breakpoint21778
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-