Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10058277

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10058277
Fusion NameHBV-UGT2A2 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEN2
Sample TypeTumor
Age29
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr4
Cytogenetic Bandq13.3
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start69617876
Hg38 End69617906
Junction Sequence-
Target Gene
Target GeneUGT2A2, UGT2A1
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11668
Virus Breakpoint21787
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-