Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10059145

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10059145
Fusion NameHBV-RPL23P6 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEP2
Sample TypeTumor
Age38
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr6
Cytogenetic Bandp21.2
Human Strand
Human Integration Location Typeexonic
Hg19 Start-
Hg19 End-
Hg38 Start39958473
Hg38 End39958506
Junction Sequence-
Target Gene
Target GeneRPL23P6, ENSG00000293066
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11097
Virus Breakpoint21220
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-