Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10059196

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10059196
Fusion NameHBV-ADH1A integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEP2
Sample TypeTumor
Age38
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr4
Cytogenetic Bandq23
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start99286356
Hg38 End99286463
Junction Sequence-
Target Gene
Target GeneADH1A, ENSG00000246090
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11420
Virus Breakpoint21463
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-