| Basic Information ▶ | |
| VISDB ID | TVIS10059772 |
|---|---|
| Fusion Name | HBV-XNDC1N integration |
| Validated | No |
| Curated Way | Curated |
| Method | Spatial transcriptome sequencing |
| Wet Assay | Yes |
| Sample ID | - |
| Sample Name | EP2 |
| Sample Type | Tumor |
| Age | 38 |
| Gender | Female |
| Disease Information ▶ | |
| Disease Name | - |
| Disease Abbreviation | - |
| Cancer | - |
| Literature ▶ | |
| PubMed ID | 37968095 |
| Journal | Gut |
| Published Year | 2024 |
| Human Genome ▶ | |
| Human Genome Version Description | GRCh38/hg38 |
| Human Genome RefSeq Accession | GCF_000001405.40 |
| Human Chromosome | chr11 |
| Cytogenetic Band | q13.4 |
| Human Strand | |
| Human Integration Location Type | intronic |
| Hg19 Start | - |
| Hg19 End | - |
| Hg38 Start | 71892372 |
| Hg38 End | 71892490 |
| Junction Sequence | - |
| Target Gene ▶ | |
| Target Gene | XNDC1N, ENSG00000296205, XNDC1N-ZNF705EP-ALG1L9P |
| Nearby Gene | - |
| Distance | - |
| Virus Information ▶ | |
| Virus Name | Hepatitis B virus |
| Virus Subtype Name | - |
| Virus Genome Accession | - |
| TaxonomyID | 10407 |
| Virus Abbreviation | HBV |
| Virus Genome | - |
| Virus Genome Length | - |
| Virus Breakpoint1 | 1782 |
| Virus Breakpoint2 | 1815 |
| Virus Gene Name | - |
| Virus Region Type | - |
| Integrated Virus Sequence | - |
| ViMIC ID | - |
Center for Precision Health
McWilliams School of Biomedical Informatics at UTHealth Houston
7000 Fannin Street, Suite 600, Houston, TX 77030
Email: Zhongming Zhao, Ph.D