Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10060530

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10060530
Fusion NameHBV-PDE4DIP integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEP3
Sample TypeTumor
Age38
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr1
Cytogenetic Bandq21.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start-
Hg19 End-
Hg38 Start148871119
Hg38 End148871169
Junction Sequence-
Target Gene
Target GenePDE4DIP
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11684
Virus Breakpoint21785
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-