Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10060601

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10060601
Fusion NameHBV-ATP6V0E2 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEP3
Sample TypeTumor
Age38
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr7
Cytogenetic Bandq36.1
Human Strand
Human Integration Location Typeexonic
Hg19 Start-
Hg19 End-
Hg38 Start149887152
Hg38 End149887184
Junction Sequence-
Target Gene
Target GeneATP6V0E2, ENSG00000303938
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11706
Virus Breakpoint21823
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-