Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10060731

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10060731
Fusion NameHBV-FBXW5 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameEP3
Sample TypeTumor
Age38
GenderMale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr9
Cytogenetic Bandq34.3
Human Strand
Human Integration Location Typeexonic
Hg19 Start-
Hg19 End-
Hg38 Start136940716
Hg38 End136940820
Junction Sequence-
Target Gene
Target GeneFBXW5
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12831
Virus Breakpoint22889
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-