Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062193

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062193
Fusion NameHBV-ENSG00000309281 integration
ValidatedNo
Curated WayCurated
MethodSpatial transcriptome sequencing
Wet AssayYes
Sample ID-
Sample NameOT6
Sample TypeTumor
Age54
GenderFemale
Disease Information
Disease Name-
Disease Abbreviation-
Cancer-
Literature
PubMed ID37968095
JournalGut
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh38/hg38
Human Genome RefSeq AccessionGCF_000001405.40
Human Chromosomechr2
Cytogenetic Bandp12
Human Strand
Human Integration Location Typeexonic
Hg19 Start-
Hg19 End-
Hg38 Start74943373
Hg38 End74943487
Junction Sequence-
Target Gene
Target GeneENSG00000309281, LINC01291
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype Name-
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11781
Virus Breakpoint21818
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-