Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062460

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062460
Fusion NameHBV-ENSG00000250978 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1108/8
Sample TypeTumor
Age41
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandq13.1
Human Strand
Human Integration Location Typeexonic
Hg19 Start66765454
Hg19 End66765516
Hg38 Start67469626
Hg38 End67469688
Junction Sequence-
Target Gene
Target GeneENSG00000250978, LINC02997
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11927
Virus Breakpoint22022
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-