Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062461

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062461
Fusion NameHBV-ENSG00000306911 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1108/8
Sample TypeTumor
Age41
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr8
Cytogenetic Bandp23.1
Human Strand
Human Integration Location Typeexonic
Hg19 Start10707898
Hg19 End10707939
Hg38 Start10850388
Hg38 End10850429
Junction Sequence-
Target Gene
Target GeneENSG00000306911
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint1357
Virus Breakpoint2469
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-