Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062464

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062464
Fusion NameHBV-ENSG00000297874 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/17
Sample TypeTumor
Age61
GenderMale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr13
Cytogenetic Bandq14.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start47930527
Hg19 End47930616
Hg38 Start47356392
Hg38 End47356481
Junction Sequence-
Target Gene
Target GeneENSG00000297874
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint13002
Virus Breakpoint23077
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-