Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062465

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062465
Fusion NameHBV-ZNF521 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/17
Sample TypeTumor
Age61
GenderMale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr18
Cytogenetic Bandq11.2
Human Strand
Human Integration Location Typeintronic
Hg19 Start22651858
Hg19 End22651998
Hg38 Start25071894
Hg38 End25072034
Junction Sequence-
Target Gene
Target GeneZNF521
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11820
Virus Breakpoint21847
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-