Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062467

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062467
Fusion NameHBV-RASGRF2 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/5
Sample TypeTumor
Age49
GenderFemale
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr5
Cytogenetic Bandq14.1
Human Strand
Human Integration Location Typeintronic
Hg19 Start80466882
Hg19 End80466983
Hg38 Start81171063
Hg38 End81171164
Junction Sequence-
Target Gene
Target GeneRASGRF2
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint12171
Virus Breakpoint22231
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-