Virus Integration Site Database Data Release 2.0

Details for VISDB ID: TVIS10062496

Genomic Region Visualization (IGV)

Basic Information
VISDB IDTVIS10062496
Fusion NameHBV-TMC8 integration
ValidatedNo
Curated WayCurated
MethodCapture-based next-generation sequencing
Wet AssayYes
Sample ID-
Sample NameFFPE-1225/21
Sample TypeTumor
Age-
Gender-
Disease Information
Disease NameNon Hodgkin Lymphoma
Disease AbbreviationNHL
CancerYes
Literature
PubMed ID39026081
JournalBritish Journal of Cancer
Published Year2024
Human Genome
Human Genome Version DescriptionGRCh37/hg19
Human Genome RefSeq AccessionGCF_000001405.13
Human Chromosomechr17
Cytogenetic Bandq25.3
Human Strand
Human Integration Location Typeexonic
Hg19 Start76133020
Hg19 End76133062
Hg38 Start78136939
Hg38 End78136981
Junction Sequence-
Target Gene
Target GeneTMC8
Nearby Gene-
Distance-
Virus Information
Virus NameHepatitis B virus
Virus Subtype NameGenotype C
Virus Genome Accession-
TaxonomyID10407
Virus AbbreviationHBV
Virus Genome-
Virus Genome Length-
Virus Breakpoint11826
Virus Breakpoint21944
Virus Gene Name-
Virus Region Type-
Integrated Virus Sequence-
ViMIC ID-